Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905602.1_cds_XP_016455854.1_49745
CDS Infomation

[gene=LOC107779872] [db_xref=GeneID:107779872] [protein=retinol dehydrogenase 12-like] [protein_id=XP_016455854.1] [location=join(43436..43689,44478..44598,44769..44886,46201..46337,47519..47620,48654..48746,51589..51661,52608..52870)] [gbkey=CDS]
Sequence

ATGGCGAAGGTGGAGGAGATTAGGAATTCGAAAGAAGAAGAAGAAGAAGCTAAGCAGCCA
TTGAAGACAACGGTGAAGAAGGAAGCATTAGGATGGATGGAATGGCTAAGAGGCTGGTTC
TATTTGGTTTTCGAGATGCTTTTTCAAAGGATATCGGCTAGTCACTTGCACAACCCTATG
CCTCTCCCTCCTATCAATGATCTCACTTGCATCGTCACTGGTTCTACCAGCGGCATCGGC
CGCGAAATCGCTCGGCAGTTGGCCGAATCAGGAGCACATGTTGTTATGGCTGTAAGGAAC
ACGAAAAATGCACAGGAATTAATACAGAAATGGCAGGAAGATTGGTCTGGCAAGGGCCTT
CCGCTCAACATTGAGGTCATGGAGCTTGATCTTCTCTCTTTGGATTCTGTTGCACGATTT
GCAGAAGCGTGGAATGCCCGCTTGGCACCATTACATGTTCTCATCAATAATGCTGGCATA
TTTTCAATAGGGGAACCACAGAAGTTTTCGAAAGATGGGTATGAAGAACACATGCAAGTG
AATCATCTAGCTCCGGCGATGCTTTCGATATTGCTTTTACCATCACTTATTAGAGGTTCT
CCGAGCCGAATTATTAACGTGAACTCTACGATGCACTATGTTGGGTTTGTTGATCCAGAA
GATATGAATGTTGTATCTGGAAAGAGAAAGTACACCAGTGTAGTGGGATACGGAGGCAGT
AAGCTTGCTCAGATTATGTTCAGTAGCGTCCTTCACAAGAGGCTACCTGCTGAAGCTGGC
ATAAGTGTAGTCTGTGTTACTCCTGGAATTGTTCTAACCAATGTTGCCAGGGATCTTCCT
CAGTTTCTGCAAGTGGGTTATCGTCTAATACCTTATTTTATATTTAATGCAGAAGAAGGC
TCTAGAAGTACCTTGTTTGCAGCAACAGATCCTCAAATATCCGAGTATTGTGAAATGCTG
AAAGCAGATGACTGGCCAGTCTGTGCTTACATTTCTCACGATTGTCGTCCCACAAATGCT
TCTGAAGAAGCACATAATGTCGAAACTTCTTATAAGGTCTGGGAGAAGACGCTAGATTTG
GTTGGCCTTCCTTTAGACTCAGTAGAGAGGCTTATAGAAGGGGAAGAAATTAAATGCCGG
TATGGGAATTCCCAGGAGTAA

Peptide Sequence

PEP ID

XP_016455854.1
PEP Infomation

PREDICTED: retinol dehydrogenase 12-like [Nicotiana tabacum]
Sequence

MAKVEEIRNSKEEEEEAKQPLKTTVKKEALGWMEWLRGWFYLVFEMLFQRISASHLHNPM
PLPPINDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNTKNAQELIQKWQEDWSGKGL
PLNIEVMELDLLSLDSVARFAEAWNARLAPLHVLINNAGIFSIGEPQKFSKDGYEEHMQV
NHLAPAMLSILLLPSLIRGSPSRIINVNSTMHYVGFVDPEDMNVVSGKRKYTSVVGYGGS
KLAQIMFSSVLHKRLPAEAGISVVCVTPGIVLTNVARDLPQFLQVGYRLIPYFIFNAEEG
SRSTLFAATDPQISEYCEMLKADDWPVCAYISHDCRPTNASEEAHNVETSYKVWEKTLDL
VGLPLDSVERLIEGEEIKCRYGNSQE

Transcript Sequence

Gene sequence data has not been registered.